Computational Neuroscience
Neurosciences computationnelles
Nous sommes une équipe de recherche en informatique modélisant des réseaux de neurones, dans le but d’étudier des synergies entre différentes formes d’apprentissage. Notre objectif est de mieux comprendre ces synergies et l’impact de certains dysfonctionnements en réalisant des modèles informatiques efficaces et en menant des expérimentations reproductibles dédiées à l’émulation de comportements autonomes et à la réalisation de fonctions cognitives. Ils ont un impact dans les domaines d’Apprentissage Machine, d’Intelligence Artificielle et de Cognition Située, mais aussi interrogent en retour nos collègues neuroscientifiques et médecins et leur proposent de nouveaux objets d’étude au niveau de phénomènes neuronaux et comportementaux. Notre recherche peut être présentée selon des thèmes correspondant à apprendre à prédire des valeurs et à apprendre à contrôler le comportement.
Axes de recherche
Axes principaux :
Axes secondaires :
Mots clés
ADHD (attention-deficit hyperactivity disorder), Alzheimer, Analyses des données, Apprentissage, Attention, Bio-informatique et analyse des données, Cognition, Comportement, Dépression, Emotion, Fonctions exécutives, Intelligence artificielle et réalité virtuelle, Interfaces humain-machine et Santé connectée, Modélisation des neurones et des réseaux de neurones, Motivation, Parkinson, Plasticité des réseaux, Prise de décision, Schizophrénie, Troubles anxieuxSelected publications
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A global framework for a systemic view of brain modeling
Frederic Alexandre.
Brain Inf.. 2021-02-16. 8 (1)
DOI: 10.1186/s40708-021-00126-4 -
Teach Your Robot Your Language! Trainable Neural Parser for Modeling Human Sentence Processing: Examples for 15 Languages
Xavier Hinaut, Johannes Twiefel.
IEEE Trans. Cogn. Dev. Syst.. 2020-06-01. 12 (2) : 179-188.
DOI: 10.1109/TCDS.2019.2957006 -
Identification of distinct pathological signatures induced by patient-derived α-synuclein structures in nonhuman primates
M. Bourdenx, A. Nioche, S. Dovero, M.-L. Arotcarena, S. Camus, G. Porras, M.-L. Thiolat, N. P. Rougier, A. Prigent, P. Aubert, S. Bohic, C. Sandt, F. Laferrière, E. Doudnikoff, N. Kruse, B. Mollenhauer, S. Novello, M. Morari, T. Leste-Lasserre, I. Trigo Damas, M. Goillandeau, C. Perier, C. Estrada, N. Garcia-Carrillo, A. Recasens, N. N. Vaikath, O. M. A. El-Agnaf, M. T. Herrero, P. Derkinderen, M. Vila, J. A. Obeso, B. Dehay, E. Bezard.
Sci. Adv.. 2020-05-01. 6 (20) : eaaz9165.
DOI: 10.1126/sciadv.aaz9165 -
New journal for reproduction and replication results
Etienne B. Roesch, Nicolas Rougier.
Nature. 2020-05-01. 581 (7806) : 30-30.
DOI: 10.1038/d41586-020-01328-2 -
A VTA GABAergic computational model of dissociated reward prediction error computation in classical conditioning
Pramod Kaushik, Jérémie Naudé, Surampudi Bapi Raju, Frédéric Alexandre.
. 2020-02-07.
DOI: 10.1101/2020.02.06.936997 -
Interacting roles of lateral and medial Orbitofrontal cortex in decision-making and learning : A system-level computational model
Bhargav Teja Nallapu, Frédéric Alexandre.
. 2019-12-06.
DOI: 10.1101/867515 -
Coordination over a unique medium of exchange under information scarcity
Aurélien Nioche, Basile Garcia, Germain Lefebvre, Thomas Boraud, Nicolas P. Rougier, Sacha Bourgeois-Gironde.
Palgrave Commun. 2019-12-01. 5 (1)
DOI: 10.1057/s41599-019-0362-2 -
Identification of distinct pathological signatures induced by patient-derived α-synuclein structures in non-human primates
M. Bourdenx, A. Nioche, S. Dovero, M.-L. Arotcarena, S. Camus, G. Porras, M.-L. Thiolat, N. P. Rougier, A. Prigent, P. Aubert, S. Bohic, C. Sandt, F. Laferrière, E. Doudnikoff, N. Kruse, B. Mollenhauer, S. Novello, M. Morari, T. Leste-Lasserre, I. Trigo Damas, M. Goillandeau, C. Perier, C. Estrada, N. Garcia-Carrillo, A. Recasens, N. N. Vaikath, O. M. A. El-Agnaf, M. Trinidad Herrero, P. Derkinderen, M. Vila, J. A. Obeso, B. Dehay, E. Bezard.
. 2019-10-31.
DOI: 10.1101/825216 -
Challenge to test reproducibility of old computer code
Konrad Hinsen, Nicolas Rougier.
Nature. 2019-10-01. 574 (7780) : 634-634.
DOI: 10.1038/d41586-019-03296-8 -
Learning to Parse Grounded Language using Reservoir Computing
Xavier Hinaut, Michael Spranger.
2019 Joint IEEE 9th International Conference on Development and Learning and Epigenetic Robotics (ICDL-EpiRob). 2019-08-01.
DOI: 10.1109/DEVLRN.2019.8850718 -
Section focused on machine learning methods for high-level cognitive capabilities in robotics
Tetsunari Inamura, Hiroki Yokoyama, Emre Ugur, Xavier Hinaut, Michael Beetze, Tadahiro Taniguchi.
Advanced Robotics. 2019-06-03. 33 (11) : 537-538.
DOI: 10.1080/01691864.2019.1625183 -
A Robust Model of Gated Working Memory
Anthony Strock, Xavier Hinaut, Nicolas P. Rougier.
. 2019-03-28.
DOI: 10.1101/589564 -
ReScience C: A Journal for Reproducible Replications in Computational Science
Nicolas P. Rougier, Konrad Hinsen.
Reproducible Research in Pattern Recognition. 2019-01-01. : 150-156.
DOI: 10.1007/978-3-030-23987-9_14 -
Using Conceptors to Transfer Between Long-Term and Short-Term Memory
Anthony Strock, Nicolas Rougier, Xavier Hinaut.
Artificial Neural Networks and Machine Learning – ICANN 2019: Workshop and Special Sessions. 2019-01-01. : 19-23.
DOI: 10.1007/978-3-030-30493-5_2 -
A Computational Model of Dual Competition between the Basal Ganglia and the Cortex
Meropi Topalidou, Daisuke Kase, Thomas Boraud, Nicolas P. Rougier.
eNeuro. 2018-12-12. : ENEURO.0339-17.2018.
DOI: 10.1523/ENEURO.0339-17.2018 -
A natural history of skills
Thomas Boraud, Arthur Leblois, Nicolas P. Rougier.
Progress in Neurobiology. 2018-12-01. 171 : 114-124.
DOI: 10.1016/j.pneurobio.2018.08.003 -
Ten Simple Rules for Scientific Fraud & Misconduct
Nicolas P Rougier, John Timmer.
. 2018-11-29.
DOI: 10.7287/peerj.preprints.27395 -
From Python to Numpy
.
. 2017-08-01.
DOI: 10.5281/zenodo.218740 -
Using neural dynamics to switch attention
J. Vitay, N. Rougier.
Proceedings. 2005 IEEE International Joint Conference on Neural Networks, 2005.. .
DOI: 10.1109/IJCNN.2005.1556384 -
Scipy Lecture Notes
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. 2015-10-2.
DOI: 10.5281/zenodo.31736 -
A Distributed Computational Model of Spatial Memory Anticipation During a Visual Search Task
Jérémy Fix, Julien Vitay, Nicolas P. Rougier.
Anticipatory Behavior in Adaptive Learning Systems. . : 170-188.
DOI: 10.1007/978-3-540-74262-3_10 -
A bio-inspired model towards vocal gesture learning in songbird
Silvia Pagliarini, Xavier Hinaut, Arthur Leblois.
2018 Joint IEEE 8th International Conference on Development and Learning and Epigenetic Robotics (ICDL-EpiRob). 2018-09-01.
DOI: 10.1109/DEVLRN.2018.8761009 -
Which input abstraction is better for a robot syntax acquisition model? phonemes, words or grammatical constructions?
Xavier Hinaut.
2018 Joint IEEE 8th International Conference on Development and Learning and Epigenetic Robotics (ICDL-EpiRob). 2018-09-01.
DOI: 10.1109/DEVLRN.2018.8761025 -
A Simple Reservoir Model of Working Memory with Real Values
Anthony Strock, Nicolas P. Rougier, Xavier Hinaut.
2018 International Joint Conference on Neural Networks (IJCNN). 2018-07-01.
DOI: 10.1109/IJCNN.2018.8489262 -
Pattern separation in the hippocampus: distinct circuits under different conditions
Randa Kassab, Frédéric Alexandre.
Brain Struct Funct. 2018-04-11. 223 (6) : 2785-2808.
DOI: 10.1007/s00429-018-1659-4 -
Code reviewing puts extra demands on referees.
Nicolas P. Rougier, Konrad Hinsen.
Nature. 2018-04-01. 556 (7701) : 309-309.
DOI: 10.1038/d41586-018-04628-w -
A Density-Driven Method for the Placement of Biological Cells Over Two-Dimensional Manifolds.
Nicolas P. Rougier.
Front. Neuroinform.. 2018-03-20. 12
DOI: 10.3389/fninf.2018.00012 -
Re-run, Repeat, Reproduce, Reuse, Replicate: Transforming Code into Scientific Contributions.
Fabien C. Y. Benureau, Nicolas P. Rougier.
Front. Neuroinform.. 2018-01-04. 11
DOI: 10.3389/fninf.2017.00069 -
Digital typography
Nicolas P. Rougier, Behdad Esfahbod.
ACM SIGGRAPH 2018 Courses on - SIGGRAPH '18. 2018-01-01.
DOI: 10.1145/3214834.3214837 -
Sustainable computational science: The ReScience Initiative
Nicolas P. Rougier, Konrad Hinsen, Frédéric Alexandre, Thomas Arildsen, Lorena A. Barba, Fabien C.Y. Benureau, C. Titus Brown, Pierre de Buyl, Ozan Caglayan, Andrew P. Davison, Marc-André Delsuc, Georgios Detorakis, Alexandra K. Diem, Damien Drix, Pierre Enel, Benoît Girard, Olivia Guest, Matt G. Hall, Rafael N. Henriques, Xavier Hinaut, Kamil S. Jaron, Mehdi Khamassi, Almar Klein, Tiina Manninen, Pietro Marchesi, Daniel McGlinn, Christoph Metzner, Owen Petchey, Hans Ekkehard Plesser, Timothée Poisot, Karthik Ram, Yoav Ram, Etienne Roesch, Cyrille Rossant, Vahid Rostami, Aaron Shifman, Joseph Stachelek, Marcel Stimberg, Frank Stollmeier, Federico Vaggi, Guillaume Viejo, Julien Vitay, Anya E. Vostinar, Roman Yurchak, Tiziano Zito.
PeerJ Computer Science. 2017-12-18. 3 : e142.
DOI: 10.7717/peerj-cs.142 -
Modeling the Role of Striatum in Stochastic Multi Context Tasks
Sabyasachi Shivkumar, V. Srinivasa Chakravarthy, Nicolas P. Rougier.
. 2017-09-30.
DOI: 10.1101/196543 -
Dual Competition between the Basal Ganglia and the Cortex: from Action-Outcome to Stimulus-Response
Meropi Topalidou, Daisuke Kase, Thomas Boraud, Nicolas P Rougier.
. 2017-09-13.
DOI: 10.1101/187294 -
Motivated self-organization
Nicolas P. Rougier, Yann Boniface.
2017 12th International Workshop on Self-Organizing Maps and Learning Vector Quantization, Clustering and Data Visualization (WSOM). 2017-06-01.
DOI: 10.1109/WSOM.2017.8020000 -
The art of scaling up : AA computational account on action selection in basal ganglia
Bhargav Teja Nallapu, Bapi Raju Surampudi, Nicolas P. Rougier.
2017 International Joint Conference on Neural Networks (IJCNN). 2017-05-01.
DOI: 10.1109/IJCNN.2017.7965835 -
Implicit Knowledge Extraction and Structuration from Electrical Diagrams
Ikram Chraibi Kaadoud, Nicolas Rougier, Frederic Alexandre.
Advances in Artificial Intelligence: From Theory to Practice. 2017-01-01. : 235-241.
DOI: 10.1007/978-3-319-60042-0_27 -
One critic, two actors: Evidence for covert learning in the basal ganglia
Meropi Topalidou, Daisuke Kase, Thomas Boraud, Nicolas P. Rougier.
. 2016-06-23.
DOI: 10.1101/060236 -
The globus pallidus pars interna in goal-oriented and routine behaviors: Resolving a long-standing paradox.
Camille Piron, Daisuke Kase, Meropi Topalidou, Michel Goillandeau, Hugues Orignac, Tho-Haï N'Guyen, Nicolas Rougier, Thomas Boraud.
Mov Disord.. 2016-02-22. 31 (8) : 1146-1154.
DOI: 10.1002/mds.26542 -
Dynamics of Reward Based Decision Making: A Computational Study
Bhargav Teja Nallapu, Nicolas P. Rougier.
Artificial Neural Networks and Machine Learning – ICANN 2016. 2016-01-01. : 322-329.
DOI: 10.1007/978-3-319-44778-0_38 -
A parsimonious computational model of visual target position encoding in the superior colliculus
Wahiba Taouali, Laurent Goffart, Frédéric Alexandre, Nicolas P. Rougier.
Biol Cybern. 2015-09-05. 109 (4-5) : 549-559.
DOI: 10.1007/s00422-015-0660-8 -
A Long Journey into Reproducible Computational Neuroscience
Meropi Topalidou, Arthur Leblois, Thomas Boraud, Nicolas P. Rougier.
Front. Comput. Neurosci.. 2015-03-05. 9
DOI: 10.3389/fncom.2015.00030 -
Ten Simple Rules for Better Figures
Nicolas P. Rougier, Michael Droettboom, Philip E. Bourne.
PLoS Comput Biol. 2014-09-11. 10 (9) : e1003833.
DOI: 10.1371/journal.pcbi.1003833 -
Structure of receptive fields in a computational model of area 3b of primary sensory cortex
Georgios Is. Detorakis, Nicolas P. Rougier.
Front. Comput. Neurosci.. 2014-07-28. 8
DOI: 10.3389/fncom.2014.00076 -
Numerical simulation scheme of one-and two-dimensional neural
fields involving space-dependent delays
Axel Hutt, Nicolas Rougier.
Neural Fields. 2014-01-01. : 175-185.
DOI: 10.1007/978-3-642-54593-1_6 -
Self-Organizing Dynamic Neural Fields
Nicolas P. Rougier, Georgios Is. Detorakis.
Advances in Cognitive Neurodynamics (III). 2013-01-01. : 281-288.
DOI: 10.1007/978-94-007-4792-0_38 -
DANA: Distributed numerical and adaptive modelling framework
Nicolas P. Rougier, Jérémy Fix.
Network: Computation in Neural Systems. 2012-09-20. 23 (4) : 237-253.
DOI: 10.3109/0954898X.2012.721573 -
A Neural Field Model of the Somatosensory Cortex: Formation, Maintenance and Reorganization of Ordered Topographic Maps
Georgios Is. Detorakis, Nicolas P. Rougier.
PLoS ONE. 2012-07-12. 7 (7) : e40257.
DOI: 10.1371/journal.pone.0040257 -
Visual Target Selection Emerges from a Bio-inspired Network Topology
Wahiba Taouali, Nicolas Rougier, Frédéric Alexandre.
Studies in Computational Intelligence. 2012-01-01. : 317-330.
DOI: 10.1007/978-3-642-27534-0_21 -
Synchronous and asynchronous evaluation of dynamic neural fields
N. P. Rougier, A. Hutt.
Journal of Difference Equations and Applications. 2011-08-01. 17 (8) : 1119-1133.
DOI: 10.1080/10236190903051575 -
Dynamic self-organising map
Nicolas Rougier, Yann Boniface.
Neurocomputing. 2011-05-01. 74 (11) : 1840-1847.
DOI: 10.1016/j.neucom.2010.06.034 -
No clock to rule them all
Wahiba Taouali, Thierry Viéville, Nicolas P. Rougier, Frédéric Alexandre.
Journal of Physiology-Paris. 2011-01-01. 105 (1-3) : 83-90.
DOI: 10.1016/j.jphysparis.2011.08.005 -
Neural Fields and Cortical Plasticity
Rougier Nicolas.
Front. Comput. Neurosci.. 2011-01-01. 5
DOI: 10.3389/conf.fncom.2011.53.00226 -
A Dynamic Neural Field Approach to the Covert and Overt Deployment of Spatial Attention
Jeremy Fix, Nicolas Rougier, Frederic Alexandre.
Cogn Comput. 2010-11-12. 3 (1) : 279-293.
DOI: 10.1007/s12559-010-9083-y -
Activity spread and breathers induced by finite transmission speeds in two-dimensional neural fields
Axel Hutt, Nicolas Rougier.
Phys. Rev. E. 2010-11-12. 82 (5)
DOI: 10.1103/PhysRevE.82.055701 -
Implicit and explicit representations
Nicolas P. Rougier.
Neural Networks. 2009-03-01. 22 (2) : 155-160.
DOI: 10.1016/j.neunet.2009.01.008 -
Asynchronous evaluation as an efficient and natural way to compute neural networks
Wahiba Taouali, Frédéric Alexandre, Axel Hutt, Nicolas P. Rougier, Theodore E. Simos, George Psihoyios, Ch. Tsitouras.
AIP Conference Proceedings. 2009-01-01.
DOI: 10.1063/1.3241522 -
From physiological principles to computational models of the cortex
Jeremy Fix, Nicolas Rougier, Frederic Alexandre.
Journal of Physiology-Paris. 2007-01-01. 101 (1-3) : 32-39.
DOI: 10.1016/j.jphysparis.2007.10.009 -
A Computational Model of Spatial Memory Anticipation during Visual Search
.
Lecture Notes in Computer Science. 2007-01-01.
DOI: 10.1007/978-3-540-74262-3 -
Emergence of attention within a neural population
Nicolas P. Rougier, Julien Vitay.
Neural Networks. 2006-06-01. 19 (5) : 573-581.
DOI: 10.1016/j.neunet.2005.04.004 -
Dynamic neural field with local inhibition
Nicolas P. Rougier.
Biol Cybern. 2005-12-10. 94 (3) : 169-179.
DOI: 10.1007/s00422-005-0034-8 -
Prefrontal cortex and flexible cognitive control: Rules without symbols
N. P. Rougier, D. C. Noelle, T. S. Braver, J. D. Cohen, R. C. O'Reilly.
Proceedings of the National Academy of Sciences. 2005-05-09. 102 (20) : 7338-7343.
DOI: 10.1073/pnas.0502455102 -
A Distributed Model of Spatial Visual Attention
Julien Vitay, Nicolas P. Rougier, Frédéric Alexandre.
Biomimetic Neural Learning for Intelligent Robots. 2005-01-01. : 54-72.
DOI: 10.1007/11521082_4 -
A distributed model of visual spatial attention
N. Rougier.
Lecture Notes in Computer Science. 2005-01-01.
DOI: 10.1007/b139051 -
Learning representations in a gated prefrontal cortex model of dynamic task switching
Nicolas P. Rougier, Randall C. O'Reilly.
Cognitive Science. 2002-07-01. 26 (4) : 503-520.
DOI: 10.1207/s15516709cog2604_4 -
Integration of Biologically Inspired Temporal Mechanisms into a Cortical Framework for Sequence Processing
Hervé Frezza-Buet, Nicolas Rougier, Frédéric Alexandre.
Sequence Learning. 2000-01-01. : 321-348.
DOI: 10.1007/3-540-44565-x_15
Chef(s) d'équipe
Membres de l'équipe
Chercheurs, Praticiens hospitaliers...
Frédéric Alexandre
Alexandre
(Chercheur)
Thierry Vieville Vieville (Chercheur)
Xavier Hinaut Hinaut (Chercheur)
Amélie Aussel Aussel (Chercheuse)
Thierry Vieville Vieville (Chercheur)
Xavier Hinaut Hinaut (Chercheur)
Amélie Aussel Aussel (Chercheuse)
Ingénieur(e)s, technicien(ne)s
Post-doctorant(s)
Doctorant(s)
Snigdha Dagar
Dagar
Nikolaos Vardalakis Vardalakis
Chloé Mercier Mercier
Hugo Chateau-Laurent Chateau-Laurent
Subba Reddy Oota Oota
Maeva Andriantsoamberomanga Andriantsoamberomanga
Fjola Hyseni Hyseni
Naomi Chaix-Eichel Chaix-Eichel
Nathan Trouvain Trouvain
Nikolaos Vardalakis Vardalakis
Chloé Mercier Mercier
Hugo Chateau-Laurent Chateau-Laurent
Subba Reddy Oota Oota
Maeva Andriantsoamberomanga Andriantsoamberomanga
Fjola Hyseni Hyseni
Naomi Chaix-Eichel Chaix-Eichel
Nathan Trouvain Trouvain
Neuropsychologue(s) et orthophoniste(s)
Ingénieur(s) hospitalier(s) et ARC